MRI Methods

Align AC PC to horizontal

anat

shell

code

visualization

alignment

Translate your structural scans to AC-PC alignment for visualization and display.

Anatomical

anat

visualization

alignment

registration

brain extraction

segmentation

All things anatomical MRI

Arterial Spin Labelling

arterial spin labelling

blood flow

Measuring cerebral blood flow

DTI

diffusion

eddy currents

visualization

tensor

NODDI

Tractography

All things diffusion MRI

EEG-fMRI Ballistocardiogram Cleaning (Rodriguez method)

eeg-fmri

code

matlab

preprocessing

eeg

Reverse engineered code from Rodriguez (2016) for removal of the ballistocardiogram artifacts from EEG-fMRI data when the ECG fails to give a good signal. This code requires Matlab and the Signal Processing Toolbox.

EEG-fMRI Data Cleaning & Forward Solution

eeg-fmri

code

matlab

eeglab

mne

freesurfer

preprocessing

eeg

Reverse engineered code from Rodriguez (2016) for removal of the ballistocardiogram artifacts from EEG-fMRI data when the ECG fails to give a good signal. This code requires Matlab and the Signal Processing Toolbox.

Multi-Echo fMRI

-fmri -methods

fMRI with multiple echoes

Alexander Weber

fMRI

functional

t2*

visualization

resting state

task

All things functional MRI